Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884965.1_cds_XP_016439015.1_34617
CDS Infomation

[gene=LOC107764952] [db_xref=GeneID:107764952] [protein=proline dehydrogenase 2, mitochondrial-like] [protein_id=XP_016439015.1] [location=join(1000..1554,2907..3552,3679..3919,4008..4050)] [gbkey=CDS]
Sequence

ATGGCAAACAAAGTTGTATATCCTAAGGTTTTCCGTGACCTCCGATCATTTGTCCGATGT
CTAAACACGGCCCCGACTGTGCCGCCGATGAATTTCACCGGCACCTATGATGCTACGACT
GTCACAACACCGACCTTAATACCAACGGACCAAGTAATCACTGCTGACAAAAAAGTGATT
AATTTTGAGGATGTTAAGGAGCTGTTTACGGGTGTGTCAACCTTAAAGTTGATTAGATCA
TCGTTGACACTTCAAATGGCAGCGATTGAGCCTATGGTTGACGTAGGCATATGGGTAATG
AATTCAAAGCTCATGCATATGCCAATAGTCAAGGAAGTAATTCTGGGGTTTGTAAAAGGT
ACATTTTATGAACATTTTTGTGCTGGAAAAGACTTAACAGAAGTACGCAGGACTGTCACT
AAGCTGTCGGATGTCGGGTTAAAAGGAATGCTTGATTATGGGGTGGAACATGCAACTGAA
AATGAGTCTTGTGATCAGAGTATGAAGGTTTTTCTTCAGACTGCTGAATCAACCAAGTCA
CTTCCATCCTCTTCGGTAAGCTTTGTGGTAGTGAAGGTAACAGCAATTTGTACACCTAAG
CTGCTCAAAAGAATGAGCGATTTGCTGAGATGGGAACACAAGAATCCATCTTTCAATCTC
CCATGGAAGCACAAGTCCATTCCACTTTTCTCTGATTCCAGCCCTTTTTATCACACTCCA
CAAAAGCCAGAGCCTCTAACGGTCGAAGAAGAACATGATCTACAATTAGCTCATGAAAGA
CTCATGACTATTTGCAAAAAATGCTTAGAACTTGATGTTGATTTACTAATTGATGCTGAA
GATACAGCTATTCAACCCGCAATTGATTACTTTGCATATTCTGCGGCAATTAAGTATCAC
AAAGATGATGACCCTTTGATTTTTGGAACAATTCAAGCTTACTTGAAAGATGCTAAAGAA
AGAATGGTTATAGCTAAAAAGGCTGCTGAGAAAATGGGAGTTCCAATGGGTTTTAAGCTT
GTGAGGGGTGCTTATATGTCAAGTGAAAGAGAATTGGCTTCTCGTTTAGGCGTTCAGTCT
CCAATTCATGATAGCATTCAGCAAACACATGACTGCTTTAATTCTTGTGCTGAGTTTATG
CTTGACGAGATTTCTAATGGCTCTGGTGCAGTTGTTCTTGCAACTCATAATATTGAGTCA
GGAAAACTGGCTGCATCCAAGGCTATAGATCTAGGAATCAGAAAGGATAGACAAAAGCTC
CAATTTGCTCAGTTATATGGTATGGCAGAAGGTCTTTCCTTTGGCCTGAGAAATGCAGGA
TTTCAAGTAAGCAAGTATTTACCGTTCGGACCAGTAGAGCAGGTGATGCCATACCTTATA
CGGAGAGCTGAAGAAAACAGAGGTCTCTTGTCTACATCGGCCTTCGACAGGCAACTAATG
AGGAAGGAGTTAACCAGGAGATTTAAAGTGGCAACTTCATGNTGA

Peptide Sequence

PEP ID

XP_016439015.1
PEP Infomation

PREDICTED: proline dehydrogenase 2, mitochondrial-like [Nicotiana tabacum]
Sequence

MANKVVYPKVFRDLRSFVRCLNTAPTVPPMNFTGTYDATTVTTPTLIPTDQVITADKKVI
NFEDVKELFTGVSTLKLIRSSLTLQMAAIEPMVDVGIWVMNSKLMHMPIVKEVILGFVKG
TFYEHFCAGKDLTEVRRTVTKLSDVGLKGMLDYGVEHATENESCDQSMKVFLQTAESTKS
LPSSSVSFVVVKVTAICTPKLLKRMSDLLRWEHKNPSFNLPWKHKSIPLFSDSSPFYHTP
QKPEPLTVEEEHDLQLAHERLMTICKKCLELDVDLLIDAEDTAIQPAIDYFAYSAAIKYH
KDDDPLIFGTIQAYLKDAKERMVIAKKAAEKMGVPMGFKLVRGAYMSSERELASRLGVQS
PIHDSIQQTHDCFNSCAEFMLDEISNGSGAVVLATHNIESGKLAASKAIDLGIRKDRQKL
QFAQLYGMAEGLSFGLRNAGFQVSKYLPFGPVEQVMPYLIRRAEENRGLLSTSAFDRQLM
RKELTRRFKVATSX

Transcript Sequence

Gene sequence data has not been registered.